Pseudomonas putida S16, PPS_3063

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3063
Name
Replicon chromosome
Genomic location 3438654 - 3439004 (+ strand)

Cross-References

RefSeq YP_004702492.1
GI 339487964
Entrez 10938695
INSDC AEJ13612.1
NCBI Locus Tag PPS_3063
UniParc UPI0002173533
UniProtKB Acc F8G1N3
UniProtKB ID F8G1N3_PSEP6
UniRef100 UniRef100_A0A099N0C9
UniRef50 UniRef50_Q2LX48
UniRef90 UniRef90_B0KPQ3

Product

Feature Type CDS
Coding Frame 1
Product Name
cupin
Synonyms
Evidence for Translation
Charge (pH 7) -3.11
Kyte-Doolittle Hydrophobicity Value -0.176
Molecular Weight (kDa) 12.8
Isoelectric Point (pI) 5.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 93 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016376 (41 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3063
Search term: cupin

Human Homologs

References

No references are associated with this feature.