Pseudomonas putida S16, PPS_3305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3305
Name
Replicon chromosome
Genomic location 3707408 - 3708058 (- strand)

Cross-References

RefSeq YP_004702732.1
GI 339488204
Entrez 10938935
INSDC AEJ13852.1
NCBI Locus Tag PPS_3305
UniParc UPI0002173CAD
UniProtKB Acc F8G4Z3
UniProtKB ID F8G4Z3_PSEP6
UniRef100 UniRef100_A0A099N3A7
UniRef50 UniRef50_A4VND9
UniRef90 UniRef90_A5W1T0

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c-type protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.93
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 22.7
Isoelectric Point (pI) 6.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 154 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003071 (409 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3305

Human Homologs

References

No references are associated with this feature.