Pseudomonas putida S16, PPS_3468

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3468
Name
Replicon	chromosome
Genomic location	3908588 - 3909751 (+ strand)

Cross-References

RefSeq	YP_004702895.1
GI	339488367
Entrez	10939098
INSDC	AEJ14015.1
NCBI Locus Tag	PPS_3468
UniParc	UPI00021730C9
UniProtKB Acc	F8G647
UniProtKB ID	F8G647_PSEP6
UniRef100	UniRef100_A0A099N1G7
UniRef50	UniRef50_G8PXS5
UniRef90	UniRef90_G8PXS5

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyl-CoA dehydrogenase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.95
Kyte-Doolittle Hydrophobicity Value	-0.213
Molecular Weight (kDa)	42.6
Isoelectric Point (pI)	6.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 485 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003424 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3468 Search term: acyl-CoA dehydrogenase domain-containing protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000499074 isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186] E-value: 1.7e-140 Percent Identity: 64.8
Ensembl 110, assembly GRCh38.p14	ENSP00000418397 isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186] E-value: 1.7e-140 Percent Identity: 64.8

References