Pseudomonas putida S16, PPS_3471

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3471
Name
Replicon	chromosome
Genomic location	3912194 - 3914146 (+ strand)

Cross-References

RefSeq	YP_004702898.1
GI	339488370
Entrez	10939101
INSDC	AEJ14018.1
NCBI Locus Tag	PPS_3471
UniParc	UPI00021730CC
UniProtKB Acc	F8G650
UniProtKB ID	F8G650_PSEP6
UniRef100	UniRef100_A0A099N3L0
UniRef50	UniRef50_Q9I299
UniRef90	UniRef90_Q1I889

Product

Feature Type	CDS
Coding Frame	1
Product Name	carbamoyl-phosphate synthase L chain, ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-18.29
Kyte-Doolittle Hydrophobicity Value	-0.048
Molecular Weight (kDa)	69.5
Isoelectric Point (pI)	5.32

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 643 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003427 (523 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3471 Search term: carbamoyl-phosphate synthase L chain, ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000265594 methylcrotonyl-CoA carboxylase subunit 1 [Source:HGNC Symbol;Acc:HGNC:6936] E-value: 3.1e-155 Percent Identity: 47.5

References