Pseudomonas putida S16, PPS_3538

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3538
Name
Replicon chromosome
Genomic location 3980764 - 3981522 (- strand)

Cross-References

RefSeq YP_004702963.1
GI 339488435
Entrez 10939166
INSDC AEJ14083.1
NCBI Locus Tag PPS_3538
UniParc UPI00021731FA
UniProtKB Acc F8FSI4
UniProtKB ID F8FSI4_PSEP6
UniRef100 UniRef100_A0A099N386
UniRef50 UniRef50_G8QBM5
UniRef90 UniRef90_A0A099N386

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit epsilon
Synonyms
Evidence for Translation
Charge (pH 7) -12.68
Kyte-Doolittle Hydrophobicity Value -0.168
Molecular Weight (kDa) 27.2
Isoelectric Point (pI) 4.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 475 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003582 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3538

Human Homologs

References

No references are associated with this feature.