Pseudomonas putida S16, PPS_3826

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3826
Name
Replicon	chromosome
Genomic location	4315184 - 4316404 (- strand)

Cross-References

RefSeq	YP_004703247.1
GI	339488719
Entrez	10939450
INSDC	AEJ14367.1
NCBI Locus Tag	PPS_3826
UniParc	UPI0002173AA9
UniProtKB Acc	F8FWK2
UniProtKB ID	F8FWK2_PSEP6
UniRef100	UniRef100_V9X156
UniRef50	UniRef50_P40732
UniRef90	UniRef90_P59319

Product

Feature Type	CDS
Coding Frame	1
Product Name	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.08
Kyte-Doolittle Hydrophobicity Value	-0.042
Molecular Weight (kDa)	43.5
Isoelectric Point (pI)	6.45

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000862 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3826 Search term: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000357838 ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091] E-value: 1.9e-62 Percent Identity: 36.1

References