Pseudomonas putida S16, PPS_3827

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3827
Name
Replicon chromosome
Genomic location 4316837 - 4317817 (- strand)

Cross-References

RefSeq YP_004703248.1
GI 339488720
Entrez 10939451
INSDC AEJ14368.1
NCBI Locus Tag PPS_3827
UniParc UPI0002173BAD
UniProtKB Acc F8FWK3
UniProtKB ID F8FWK3_PSEP6
UniRef100 UniRef100_F8FWK3
UniRef50 UniRef50_Q885K1
UniRef90 UniRef90_T2H585

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.78
Kyte-Doolittle Hydrophobicity Value -0.198
Molecular Weight (kDa) 36405.3
Isoelectric Point (pI) 7.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 416 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000860 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3827

Human Homologs

References

No references are associated with this feature.