Pseudomonas putida S16, PPS_3902

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3902
Name
Replicon chromosome
Genomic location 4403091 - 4403516 (- strand)

Cross-References

RefSeq YP_004703323.1
GI 339488795
Entrez 10939526
INSDC AEJ14443.1
NCBI Locus Tag PPS_3902
UniParc UPI0002173DD0
UniProtKB Acc F8FXX0
UniProtKB ID F8FXX0_PSEP6
UniRef100 UniRef100_A0A099N2L8
UniRef50 UniRef50_R9V9X0
UniRef90 UniRef90_R9V9X0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.93
Kyte-Doolittle Hydrophobicity Value -0.279
Molecular Weight (kDa) 16.0
Isoelectric Point (pI) 5.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3F7S UNKNOWN FUNCTION 11/10/08 CRYSTAL STRUCTURE OF A NTF2-LIKE PROTEIN OF UNKNOWN FUNCTION (PP_4556) FROM PSEUDOMONAS PUTIDA KT2440 AT 2.11 A RESOLUTION Pseudomonas putida KT2440 2.11 X-RAY DIFFRACTION 92.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 33 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000541 (447 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3902

Human Homologs

References

No references are associated with this feature.