Pseudomonas putida S16, PPS_3981

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3981
Name
Replicon	chromosome
Genomic location	4500034 - 4500594 (+ strand)

Cross-References

RefSeq	YP_004703402.1
GI	339488874
Entrez	10939605
INSDC	AEJ14522.1
NCBI Locus Tag	PPS_3981
UniParc	UPI0002173FE7
UniProtKB Acc	F8FZ98
UniProtKB ID	F8FZ98_PSEP6
UniRef100	UniRef100_A0A099N5E5
UniRef50	UniRef50_S3NH03
UniRef90	UniRef90_Q1I6H4

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative glycine cleavage system transcriptional repressor
Synonyms
Evidence for Translation
Charge (pH 7)	-5.38
Kyte-Doolittle Hydrophobicity Value	0.048
Molecular Weight (kDa)	20.5
Isoelectric Point (pI)	4.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000972 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3981 Search term: putative glycine cleavage system transcriptional repressor

Human Homologs

References