Pseudomonas putida S16, PPS_4016

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4016
Name
Replicon chromosome
Genomic location 4536837 - 4538129 (+ strand)

Cross-References

RefSeq YP_004703437.1
GI 339488909
Entrez 10939640
INSDC AEJ14557.1
NCBI Locus Tag PPS_4016
UniParc UPI00021740DD
UniProtKB Acc F8G0H9
UniProtKB ID F8G0H9_PSEP6
UniRef100 UniRef100_A0A099N5H1
UniRef50 UniRef50_G8QC72
UniRef90 UniRef90_Q88NK6

Product

Feature Type CDS
Coding Frame 1
Product Name
virulence factor family protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.70
Kyte-Doolittle Hydrophobicity Value -0.258
Molecular Weight (kDa) 46.9
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 34 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000885 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4016

Human Homologs

References

No references are associated with this feature.