Pseudomonas putida S16, PPS_4026

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4026
Name
Replicon chromosome
Genomic location 4547977 - 4548669 (+ strand)

Cross-References

RefSeq YP_004703447.1
GI 339488919
Entrez 10939650
INSDC AEJ14567.1
NCBI Locus Tag PPS_4026
UniParc UPI00021740E6
UniProtKB Acc F8G0I9
UniProtKB ID F8G0I9_PSEP6
UniRef100 UniRef100_A0A059UWE1
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_A0A0A7PQZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.38
Kyte-Doolittle Hydrophobicity Value -0.098
Molecular Weight (kDa) 25.4
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4026

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 7.2e-30
Percent Identity: 48.9

References

No references are associated with this feature.