Pseudomonas putida S16, PPS_4030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4030
Name
Replicon chromosome
Genomic location 4552778 - 4553383 (- strand)

Cross-References

RefSeq YP_004703451.1
GI 339488923
Entrez 10939654
INSDC AEJ14571.1
NCBI Locus Tag PPS_4030
UniParc UPI00021740EA
UniProtKB Acc F8G0J3
UniProtKB ID F8G0J3_PSEP6
UniRef100 UniRef100_A0A059UTP0
UniRef50 UniRef50_Q4K874
UniRef90 UniRef90_T2H3G0

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane protein H1
Synonyms
Evidence for Translation
Charge (pH 7) -0.33
Kyte-Doolittle Hydrophobicity Value -0.372
Molecular Weight (kDa) 21.5
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001136 (448 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4030

Human Homologs

References

No references are associated with this feature.