Pseudomonas putida S16, PPS_4075

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4075
Name
Replicon chromosome
Genomic location 4600959 - 4602224 (- strand)

Cross-References

RefSeq YP_004703494.1
GI 339488966
Entrez 10939697
INSDC AEJ14614.1
NCBI Locus Tag PPS_4075
UniParc UPI0002173104
UniProtKB Acc F8G0N6
UniProtKB ID F8G0N6_PSEP6
UniRef100 UniRef100_A0A099N5L4
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_A0A099N5L4

Product

Feature Type CDS
Coding Frame 1
Product Name
porin
Synonyms
Evidence for Translation
Charge (pH 7) -2.83
Kyte-Doolittle Hydrophobicity Value -0.364
Molecular Weight (kDa) 46.3
Isoelectric Point (pI) 6.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002549 (365 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4075
Search term: porin

Human Homologs

References

No references are associated with this feature.