Pseudomonas putida S16, PPS_4105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4105
Name
Replicon chromosome
Genomic location 4652334 - 4653425 (- strand)

Cross-References

RefSeq YP_004703524.1
GI 339488996
Entrez 10939727
INSDC AEJ14644.1
NCBI Locus Tag PPS_4105
UniParc UPI0002173211
UniProtKB Acc F8G1W0
UniProtKB ID F8G1W0_PSEP6
UniRef100 UniRef100_A0A099N5N7
UniRef50 UniRef50_A0A031G3D2
UniRef90 UniRef90_B0KTQ0

Product

Feature Type CDS
Coding Frame 1
Product Name
zinc-dependent hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) 6.89
Kyte-Doolittle Hydrophobicity Value -0.250
Molecular Weight (kDa) 40.9
Isoelectric Point (pI) 10.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 254 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001710 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4105

Human Homologs

Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2
Ensembl 110, assembly GRCh38.p14
N-acyl phosphatidylethanolamine phospholipase D [Source:HGNC Symbol;Acc:HGNC:21683]
E-value: 1.1e-51
Percent Identity: 38.2

References

No references are associated with this feature.