Pseudomonas putida S16, PPS_4217

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_4217
Name
Replicon	chromosome
Genomic location	4780801 - 4782600 (- strand)

Cross-References

RefSeq	YP_004703636.1
GI	339489108
Entrez	10939839
INSDC	AEJ14756.1
NCBI Locus Tag	PPS_4217
UniParc	UPI000217356D
UniProtKB Acc	F8G399
UniProtKB ID	F8G399_PSEP6
UniRef100	UniRef100_A0A099N523
UniRef50	UniRef50_O67618
UniRef90	UniRef90_Q87XF8

Product

Feature Type	CDS
Coding Frame	1
Product Name	GTP-binding protein LepA
Synonyms
Evidence for Translation
Charge (pH 7)	-12.05
Kyte-Doolittle Hydrophobicity Value	-0.094
Molecular Weight (kDa)	66.1
Isoelectric Point (pI)	5.43

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000741 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_4217 Search term: GTP-binding protein LepA

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000281543 GTP binding elongation factor GUF1 [Source:HGNC Symbol;Acc:HGNC:25799] E-value: 1.8e-173 Percent Identity: 49.8

References