Pseudomonas putida S16, PPS_4236
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_4236
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4800644 - 4801348 (- strand) |
Cross-References
| RefSeq | YP_004703653.1 |
| GI | 339489125 |
| Entrez | 10939856 |
| NCBI Locus Tag | PPS_4236 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
uracil-DNA glycosylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.06 |
| Kyte-Doolittle Hydrophobicity Value | -0.221 |
| Molecular Weight (kDa) | 26064.7 |
| Isoelectric Point (pI) | 7.69 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 352 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000724 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_4236
Search term: uracil-DNA glycosylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value:
5.2e-60
Percent Identity:
51.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value:
5.2e-60
Percent Identity:
51.2
|
References
No references are associated with this feature.