Pseudomonas putida S16, PPS_4361

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_4361
Name
Replicon	chromosome
Genomic location	4940112 - 4941602 (- strand)

Cross-References

RefSeq	YP_004703774.1
GI	339489246
Entrez	10939977
INSDC	AEJ14894.1
NCBI Locus Tag	PPS_4361
UniParc	UPI00021739B6
UniProtKB Acc	F8G585
UniProtKB ID	F8G585_PSEP6
UniRef100	UniRef100_F8G585
UniRef50	UniRef50_Q87WY0
UniRef90	UniRef90_Q88N81

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
Synonyms
Evidence for Translation
Charge (pH 7)	-14.03
Kyte-Doolittle Hydrophobicity Value	-0.103
Molecular Weight (kDa)	53650.5
Isoelectric Point (pI)	5.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004007 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_4361 Search term: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase

Human Homologs

References