Pseudomonas putida S16, PPS_4382

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4382
Name
Replicon chromosome
Genomic location 4959427 - 4960776 (- strand)

Cross-References

RefSeq YP_004703795.1
GI 339489267
Entrez 10939998
INSDC AEJ14915.1
NCBI Locus Tag PPS_4382
UniParc UPI0002173AB3
UniProtKB Acc F8G5A6
UniProtKB ID F8G5A6_PSEP6
UniRef100 UniRef100_A0A099N5J8
UniRef50 UniRef50_Q9HVX6
UniRef90 UniRef90_Q88NA1

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophanyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -6.38
Kyte-Doolittle Hydrophobicity Value -0.282
Molecular Weight (kDa) 49.3
Isoelectric Point (pI) 5.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004028 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4382

Human Homologs

Ensembl 110, assembly GRCh38.p14
tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
E-value: 1.8e-37
Percent Identity: 31.2

References

No references are associated with this feature.