Pseudomonas putida S16, PPS_4769

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4769
Name
Replicon chromosome
Genomic location 5399054 - 5401204 (- strand)

Cross-References

RefSeq YP_004704180.1
GI 339489652
Entrez 10940383
INSDC AEJ15300.1
NCBI Locus Tag PPS_4769
UniParc UPI0002173575
UniProtKB Acc F8FU09
UniProtKB ID F8FU09_PSEP6
UniRef100 UniRef100_F8FU09
UniRef50 UniRef50_Q0JYT0
UniRef90 UniRef90_I7C1X0

Product

Feature Type CDS
Coding Frame 1
Product Name
toxin secretion ABC transporter protein
Synonyms
Evidence for Translation
Charge (pH 7) 6.21
Kyte-Doolittle Hydrophobicity Value 0.291
Molecular Weight (kDa) 78384.2
Isoelectric Point (pI) 8.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001556 (830 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4769

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.4e-68
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.4e-68
Percent Identity: 32.7
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.4e-68
Percent Identity: 32.7

References

No references are associated with this feature.