Pseudomonas putida S16, PPS_4838

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4838
Name
Replicon chromosome
Genomic location 5485957 - 5486862 (+ strand)

Cross-References

RefSeq YP_004704247.1
GI 339489719
Entrez 10940450
INSDC AEJ15367.1
NCBI Locus Tag PPS_4838
UniParc UPI00021737AB
UniProtKB Acc F8FVC6
UniProtKB ID F8FVC6_PSEP6
UniRef100 UniRef100_A0A099N7U2
UniRef50 UniRef50_A0A031MD39
UniRef90 UniRef90_T2HDB0

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB family protein
Synonyms
Evidence for Translation
Charge (pH 7) 8.73
Kyte-Doolittle Hydrophobicity Value -0.496
Molecular Weight (kDa) 33.5
Isoelectric Point (pI) 10.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 92 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000397 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4838

Human Homologs

References

No references are associated with this feature.