Pseudomonas putida S16, PPS_4996

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4996
Name
Replicon chromosome
Genomic location 5671210 - 5671635 (- strand)

Cross-References

RefSeq YP_004704403.1
GI 339489875
Entrez 10940606
INSDC AEJ15523.1
NCBI Locus Tag PPS_4996
UniParc UPI0002173C11
UniProtKB Acc F8FY19
UniProtKB ID F8FY19_PSEP6
UniRef100 UniRef100_A0A099N885
UniRef50 UniRef50_Q88CN2
UniRef90 UniRef90_Q88CN2

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 9.64
Kyte-Doolittle Hydrophobicity Value 1.018
Molecular Weight (kDa) 15.6
Isoelectric Point (pI) 11.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 25 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000324 (475 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4996

Human Homologs

References

No references are associated with this feature.