Pseudomonas putida S16, PPS_5031

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_5031
Name
Replicon	chromosome
Genomic location	5709024 - 5709944 (- strand)

Cross-References

RefSeq	YP_004704438.1
GI	339489910
Entrez	10940641
INSDC	AEJ15558.1
NCBI Locus Tag	PPS_5031
UniParc	UPI0002173D21
UniProtKB Acc	F8FY54
UniProtKB ID	F8FY54_PSEP6
UniRef100	UniRef100_A0A099N817
UniRef50	UniRef50_F8J7Z1
UniRef90	UniRef90_Q1I373

Product

Feature Type	CDS
Coding Frame	1
Product Name	binding-protein-dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.41
Kyte-Doolittle Hydrophobicity Value	0.722
Molecular Weight (kDa)	34.4
Isoelectric Point (pI)	7.40

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 489 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000300 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_5031 Search term: binding-protein-dependent transport system inner membrane protein

Human Homologs

References