Pseudomonas putida S16, PPS_5085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_5085
Name
Replicon chromosome
Genomic location 5769128 - 5769823 (+ strand)

Cross-References

RefSeq YP_004704492.1
GI 339489964
Entrez 10940695
INSDC AEJ15612.1
NCBI Locus Tag PPS_5085
UniParc UPI0002173F27
UniProtKB Acc F8FZF4
UniProtKB ID F8FZF4_PSEP6
UniRef100 UniRef100_F8FZF4
UniRef50 UniRef50_D7I6G3
UniRef90 UniRef90_I7B537

Product

Feature Type CDS
Coding Frame 1
Product Name
HAD family hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -8.62
Kyte-Doolittle Hydrophobicity Value -0.087
Molecular Weight (kDa) 25.7
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 381 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004859 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_5085

Human Homologs

References

No references are associated with this feature.