Pseudomonas putida S16, PPS_5270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_5270
Name
Replicon chromosome
Genomic location 5975101 - 5975877 (- strand)

Cross-References

RefSeq YP_004704677.1
GI 339490149
Entrez 10940880
INSDC AEJ15797.1
NCBI Locus Tag PPS_5270
UniParc UPI0002173360
UniProtKB Acc F8G277
UniProtKB ID F8G277_PSEP6
UniRef100 UniRef100_A0A099N6M9
UniRef50 UniRef50_Q9HT24
UniRef90 UniRef90_I7C016

Product

Feature Type CDS
Coding Frame 1
Product Name
DeoR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.61
Kyte-Doolittle Hydrophobicity Value -0.104
Molecular Weight (kDa) 28.2
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 340 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005081 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_5270

Human Homologs

References

No references are associated with this feature.