Pseudomonas putida BIRD-1, PPUBIRD1_0323
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_0323
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 373584 - 374762 (- strand) |
Cross-References
| RefSeq | YP_005928229.1 |
| GI | 386009952 |
| Entrez | 12518556 |
| NCBI Locus Tag | PPUBIRD1_0323 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Glycine betaine/L-proline ABC transporter, ATP-binding subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.52 |
| Kyte-Doolittle Hydrophobicity Value | -0.232 |
| Molecular Weight (kDa) | 43.7 |
| Isoelectric Point (pI) | 7.85 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004691 (971 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0323
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value:
4.4e-19
Percent Identity:
30.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
E-value:
4.4e-19
Percent Identity:
30.4
|
References
No references are associated with this feature.