Pseudomonas putida BIRD-1, PPUBIRD1_0338

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0338
Name
Replicon chromosome
Genomic location 389405 - 390382 (+ strand)

Cross-References

RefSeq YP_005928244.1
GI 386009967
EC Number 3.4.13.19
Entrez 12518571
NCBI Locus Tag PPUBIRD1_0338

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane dipeptidase
Synonyms
Evidence for Translation
Charge (pH 7) -8.01
Kyte-Doolittle Hydrophobicity Value -0.190
Molecular Weight (kDa) 36.0
Isoelectric Point (pI) 5.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2I5G HYDROLASE 08/24/06 Crystal strcuture of amidohydrolase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 93.2

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 276 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004953 (510 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0338

Human Homologs

Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 2.1e-22
Percent Identity: 24.7
Ensembl 110, assembly GRCh38.p14
dipeptidase 2 [Source:HGNC Symbol;Acc:HGNC:23028]
E-value: 2.1e-22
Percent Identity: 24.7

References

No references are associated with this feature.