Pseudomonas putida BIRD-1, PPUBIRD1_0646

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0646
Name
Replicon chromosome
Genomic location 729633 - 730979 (+ strand)

Cross-References

RefSeq YP_005928541.1
GI 386010264
EC Number 2.6.1.18
Entrez 12518876
NCBI Locus Tag PPUBIRD1_0646

Product

Feature Type CDS
Coding Frame 1
Product Name
Omega-amino acid--pyruvate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -1.78
Kyte-Doolittle Hydrophobicity Value -0.046
Molecular Weight (kDa) 48.6
Isoelectric Point (pI) 6.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000130 (871 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0646

Human Homologs

Ensembl 97, assembly GRCh38.p12
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 1.1e-38
Percent Identity: 28.9

References

No references are associated with this feature.