Pseudomonas putida BIRD-1, PPUBIRD1_0898 (fdxB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_0898
|
| Name |
fdxB
|
| Replicon | chromosome |
| Genomic location | 1022047 - 1022388 (+ strand) |
Cross-References
| RefSeq | YP_005928787.1 |
| GI | 386010510 |
| Entrez | 12519134 |
| NCBI Locus Tag | PPUBIRD1_0898 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
FdxB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.50 |
| Kyte-Doolittle Hydrophobicity Value | -0.181 |
| Molecular Weight (kDa) | 12.5 |
| Isoelectric Point (pI) | 4.38 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3AH7 | METAL BINDING PROTEIN | 04/20/10 | Crystal structure of the ISC-like [2Fe-2S] ferredoxin (FdxB) from Pseudomonas putida JCM 20004 | Pseudomonas putida | 1.9 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 252 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001857 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0898
Search term: fdxB
Search term: FdxB
|
Human Homologs
References
No references are associated with this feature.