Pseudomonas putida BIRD-1, PPUBIRD1_1555 (pykF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_1555
|
| Name |
pykF
|
| Replicon | chromosome |
| Genomic location | 1730205 - 1731620 (- strand) |
Cross-References
| RefSeq | YP_005929430.1 |
| GI | 386011153 |
| EC Number | 2.7.1.40 |
| Entrez | 12519790 |
| NCBI Locus Tag | PPUBIRD1_1555 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
PykF
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -5.59 |
| Kyte-Doolittle Hydrophobicity Value | -0.107 |
| Molecular Weight (kDa) | 51203.3 |
| Isoelectric Point (pI) | 5.57 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 614 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001412 (474 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_1555
Search term: pykF
Search term: PykF
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
E-value:
3.2e-85
Percent Identity:
38.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
E-value:
3.2e-85
Percent Identity:
38.7
|
References
No references are associated with this feature.