Pseudomonas putida BIRD-1, PPUBIRD1_2007

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2007
Name
Replicon chromosome
Genomic location 2260817 - 2261665 (- strand)

Cross-References

RefSeq YP_005929860.1
GI 386011583
EC Number 1.1.1.157
Entrez 12520224
NCBI Locus Tag PPUBIRD1_2007

Product

Feature Type CDS
Coding Frame 1
Product Name
3-hydroxybutyryl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -1.89
Kyte-Doolittle Hydrophobicity Value 0.210
Molecular Weight (kDa) 30.1
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 443 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG013951 (79 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2007

Human Homologs

Ensembl 107, assembly GRCh38.p13
hydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]
E-value: 8.9e-51
Percent Identity: 38.7

References

No references are associated with this feature.