Pseudomonas putida BIRD-1, PPUBIRD1_2009

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2009
Name
Replicon chromosome
Genomic location 2263032 - 2264120 (+ strand)

Cross-References

RefSeq YP_005929862.1
GI 386011585
Entrez 12520226
NCBI Locus Tag PPUBIRD1_2009

Product

Feature Type CDS
Coding Frame 1
Product Name
Helix-turn-helix domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 9.09
Kyte-Doolittle Hydrophobicity Value -0.190
Molecular Weight (kDa) 40.2
Isoelectric Point (pI) 9.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 198 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016484 (100 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2009

Human Homologs

References

No references are associated with this feature.