Pseudomonas putida BIRD-1, PPUBIRD1_2227
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
| Locus Tag |
PPUBIRD1_2227
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2533557 - 2534480 (+ strand) |
Cross-References
| RefSeq | YP_005930068.1 |
| GI | 386011791 |
| Entrez | 12520432 |
| NCBI Locus Tag | PPUBIRD1_2227 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
LysR family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.43 |
| Kyte-Doolittle Hydrophobicity Value | -0.159 |
| Molecular Weight (kDa) | 33807.0 |
| Isoelectric Point (pI) | 6.17 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 439 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG016375 (74 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2227
Search term: LysR family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.