Pseudomonas putida BIRD-1, PPUBIRD1_3048

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_3048
Name
Replicon chromosome
Genomic location 3415657 - 3416778 (- strand)

Cross-References

RefSeq YP_005930862.1
GI 386012585
Entrez 12521226
NCBI Locus Tag PPUBIRD1_3048

Product

Feature Type CDS
Coding Frame 1
Product Name
ATPase
Synonyms
Evidence for Translation
Charge (pH 7) 4.27
Kyte-Doolittle Hydrophobicity Value -0.128
Molecular Weight (kDa) 41.5
Isoelectric Point (pI) 8.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 595 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002263 (336 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_3048
Search term: ATPase

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.8e-23
Percent Identity: 29.9
Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.8e-23
Percent Identity: 29.9
Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 4.8e-23
Percent Identity: 29.9

References

No references are associated with this feature.