Strain |
Pseudomonas putida BIRD-1
GCF_000183645.1|latest |
Locus Tag |
PPUBIRD1_3125
|
Name |
|
Replicon | chromosome |
Genomic location | 3517933 - 3519345 (- strand) |
RefSeq | YP_005930936.1 |
GI | 386012659 |
EC Number | 4.1.1.25 |
Entrez | 12521300 |
NCBI Locus Tag | PPUBIRD1_3125 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
aromatic-L-amino-acid decarboxylase
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -11.70 |
Kyte-Doolittle Hydrophobicity Value | -0.120 |
Molecular Weight (kDa) | 51.7 |
Isoelectric Point (pI) | 5.06 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7XIN | LYASE | 04/13/22 | Crystal structure of DODC from Pseudomonas | Pseudomonas | 2 | X-RAY DIFFRACTION | 98.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 252 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG015765 (72 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_3125
Search term: aromatic-L-amino-acid decarboxylase
|
Ensembl
110, assembly
GRCh38.p14
|
histidine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4855]
E-value:
1.1e-88
Percent Identity:
37.4
|