Pseudomonas putida HB3267, B479_00275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_00275
Name
Replicon chromosome
Genomic location 63371 - 65329 (+ strand)

Cross-References

RefSeq YP_007226916.1
GI 431800013
Entrez 14286464
INSDC AGA70973.1
NCBI Locus Tag B479_00275
UniParc UPI00005FDD35
UniProtKB Acc L0FDF1
UniProtKB ID L0FDF1_PSEPU
UniRef100 UniRef100_A0A088NSG4
UniRef50 UniRef50_V9QM92
UniRef90 UniRef90_V9QM92

Product

Feature Type CDS
Coding Frame 1
Product Name
integrase catalytic region
Synonyms
Evidence for Translation
Charge (pH 7) 24.19
Kyte-Doolittle Hydrophobicity Value -0.458
Molecular Weight (kDa) 74.4
Isoelectric Point (pI) 9.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 141 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015019 (71 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_00275

Human Homologs

References

No references are associated with this feature.