Pseudomonas putida HB3267, B479_04675 (secF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_04675
Name
secF
Replicon chromosome
Genomic location 1056841 - 1057749 (+ strand)

Cross-References

RefSeq YP_007227794.1
GI 431800891
Entrez 14287342
INSDC AGA71851.1
NCBI Locus Tag B479_04675
UniParc UPI0002173AF5
UniProtKB Acc L0FGH1
UniProtKB ID L0FGH1_PSEPU
UniRef100 UniRef100_A0A099MTR0
UniRef50 UniRef50_E9RGS4
UniRef90 UniRef90_Q88PL4

Product

Feature Type CDS
Coding Frame 1
Product Name
preprotein translocase subunit SecF
Synonyms
Evidence for Translation
Charge (pH 7) -3.52
Kyte-Doolittle Hydrophobicity Value 0.555
Molecular Weight (kDa) 32.8
Isoelectric Point (pI) 5.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 590 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001846 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_04675
Search term: secF

Human Homologs

References

No references are associated with this feature.