Pseudomonas putida HB3267, B479_05340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_05340
Name
Replicon chromosome
Genomic location 1200515 - 1201240 (+ strand)

Cross-References

RefSeq YP_007227927.1
GI 431801024
Entrez 14287475
INSDC AGA71984.1
NCBI Locus Tag B479_05340
UniParc UPI0002173E4C
UniProtKB Acc L0FDR1
UniProtKB ID L0FDR1_PSEPU
UniRef100 UniRef100_A0A099MU39
UniRef50 UniRef50_Q88P41
UniRef90 UniRef90_Q88P41

Product

Feature Type CDS
Coding Frame 1
Product Name
two component transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -1.64
Kyte-Doolittle Hydrophobicity Value -0.293
Molecular Weight (kDa) 27.1
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002424 (483 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_05340

Human Homologs

References

No references are associated with this feature.