Pseudomonas putida HB3267, B479_05415 (xseA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida HB3267
GCF_000325725.1|latest |
| Locus Tag |
B479_05415
|
| Name |
xseA
|
| Replicon | chromosome |
| Genomic location | 1217923 - 1219302 (- strand) |
Cross-References
| RefSeq | YP_007227942.1 |
| GI | 431801039 |
| EC Number | 3.1.11.6 |
| Entrez | 14287490 |
| NCBI Locus Tag | B479_05415 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
exodeoxyribonuclease VII large subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 14.86 |
| Kyte-Doolittle Hydrophobicity Value | -0.262 |
| Molecular Weight (kDa) | 51327.4 |
| Isoelectric Point (pI) | 11.02 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001887 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: B479_05415
Search term: xseA
Search term: exodeoxyribonuclease VII large subunit
|
Human Homologs
References
No references are associated with this feature.