Pseudomonas putida HB3267, B479_06830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_06830
Name
Replicon chromosome
Genomic location 1525322 - 1528087 (+ strand)

Cross-References

RefSeq YP_007228225.1
GI 431801322
Entrez 14287773
INSDC AGA72282.1
NCBI Locus Tag B479_06830
UniParc UPI0002A17669
UniProtKB Acc L0FG52
UniProtKB ID L0FG52_PSEPU
UniRef100 UniRef100_L0FG52
UniRef50 UniRef50_P0AES4
UniRef90 UniRef90_Q88M08

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA gyrase subunit A
Synonyms
Evidence for Translation
Charge (pH 7) -40.34
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 101639.6
Isoelectric Point (pI) 4.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
Pseudomonas aeruginosa gyrA conferring resistance to fluoroquinolones Point mutation of Pseudomonas aeruginosa gyrA resulted in the lowered affinity between fluoroquinolones and gyrA. Thus, conferring resistance. [PMID:22821356, PMID:8540700] ARO:3003684 protein variant model T83I Strict 1522.3 85.64 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 631 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002447 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_06830

Human Homologs

References

No references are associated with this feature.