Pseudomonas putida HB3267, B479_08400 (lolD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_08400
Name
lolD
Replicon chromosome
Genomic location 1887781 - 1888479 (+ strand)

Cross-References

RefSeq YP_007228535.1
GI 431801632
Entrez 14288083
INSDC AGA72592.1
NCBI Locus Tag B479_08400
UniParc UPI0002173180
UniProtKB Acc L0FH35
UniProtKB ID L0FH35_PSEPU
UniRef100 UniRef100_A0A099MWB9
UniRef50 UniRef50_Q9HZL7
UniRef90 UniRef90_Q88KY4

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein transporter ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) 0.11
Kyte-Doolittle Hydrophobicity Value -0.172
Molecular Weight (kDa) 25.3
Isoelectric Point (pI) 7.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002595 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_08400
Search term: lolD

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 3.9e-23
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 3.9e-23
Percent Identity: 34.4
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 3.9e-23
Percent Identity: 34.4

References

No references are associated with this feature.