Pseudomonas putida HB3267, B479_08995

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_08995
Name
Replicon chromosome
Genomic location 1994591 - 1995454 (+ strand)

Cross-References

RefSeq YP_007228648.1
GI 431801745
Entrez 14288196
INSDC AGA72705.1
NCBI Locus Tag B479_08995
UniParc UPI0002A15F9E
UniProtKB Acc L0FJ63
UniProtKB ID L0FJ63_PSEPU
UniRef100 UniRef100_V9WRM3
UniRef50 UniRef50_Q4K9L9
UniRef90 UniRef90_I7C017

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.81
Kyte-Doolittle Hydrophobicity Value 0.013
Molecular Weight (kDa) 31.3
Isoelectric Point (pI) 7.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 528 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001252 (445 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_08995

Human Homologs

References

No references are associated with this feature.