Pseudomonas putida HB3267, B479_10000
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida HB3267
GCF_000325725.1|latest |
| Locus Tag |
B479_10000
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2223002 - 2223910 (+ strand) |
Cross-References
| RefSeq | YP_007228845.1 |
| GI | 431801942 |
| Entrez | 14288393 |
| NCBI Locus Tag | B479_10000 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ribokinase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.19 |
| Kyte-Doolittle Hydrophobicity Value | 0.257 |
| Molecular Weight (kDa) | 31015.2 |
| Isoelectric Point (pI) | 4.92 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 533 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003482 (485 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: B479_10000
Search term: ribokinase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
E-value:
2.7e-45
Percent Identity:
39.1
|
References
No references are associated with this feature.