Pseudomonas putida HB3267, B479_11230
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida HB3267
GCF_000325725.1|latest |
| Locus Tag |
B479_11230
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2472678 - 2474531 (- strand) |
Cross-References
| RefSeq | YP_007229087.1 |
| GI | 431802184 |
| Entrez | 14288635 |
| NCBI Locus Tag | B479_11230 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.36 |
| Kyte-Doolittle Hydrophobicity Value | 0.222 |
| Molecular Weight (kDa) | 67428.5 |
| Isoelectric Point (pI) | 6.93 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015812 (108 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: B479_11230
Search term: ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value:
9.2e-64
Percent Identity:
39.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value:
9.2e-64
Percent Identity:
39.6
|
References
No references are associated with this feature.