Pseudomonas putida HB3267, B479_13460 (benD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_13460
Name
benD
Replicon chromosome
Genomic location 2941256 - 2942017 (- strand)

Cross-References

RefSeq YP_007229531.1
GI 431802628
EC Number 1.3.1.25
Entrez 14289079
INSDC AGA73588.1
NCBI Locus Tag B479_13460
UniParc UPI0002173D98
UniProtKB Acc L0FKR3
UniProtKB ID L0FKR3_PSEPU
UniRef100 UniRef100_A0A099MZF7
UniRef50 UniRef50_P07772
UniRef90 UniRef90_Q1I8X1

Product

Feature Type CDS
Coding Frame 1
Product Name
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -4.95
Kyte-Doolittle Hydrophobicity Value -0.064
Molecular Weight (kDa) 27.1
Isoelectric Point (pI) 5.34

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003049 (436 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_13460
Search term: benD

Human Homologs

Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 6.7e-21
Percent Identity: 34.9
Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 6.7e-21
Percent Identity: 34.9

References

No references are associated with this feature.