Pseudomonas putida HB3267, B479_16085

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_16085
Name
Replicon chromosome
Genomic location 3568256 - 3568615 (+ strand)

Cross-References

RefSeq YP_007230052.1
GI 431803149
Entrez 14289600
INSDC AGA74109.1
NCBI Locus Tag B479_16085
UniParc UPI0002A16027
UniProtKB Acc L0FJI8
UniProtKB ID L0FJI8_PSEPU
UniRef100 UniRef100_A0A099N312
UniRef50 UniRef50_Q9HW86
UniRef90 UniRef90_T2H760

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator MvaT, P16 subunit
Synonyms
Evidence for Translation
Charge (pH 7) 9.47
Kyte-Doolittle Hydrophobicity Value -0.650
Molecular Weight (kDa) 13.5
Isoelectric Point (pI) 10.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
8H8H TRANSCRIPTION 10/22/22 Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50) Pseudomonas putida KT2440 2.7 X-RAY DIFFRACTION 100.0
5B52 TRANSCRIPTION 04/21/16 Crystal structure of the N-terminal domain of H-NS family protein TurB Pseudomonas putida (strain KT2440) 2.3 X-RAY DIFFRACTION 98.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002890 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_16085

Human Homologs

References

No references are associated with this feature.