Pseudomonas putida HB3267, B479_16260

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_16260
Name
Replicon chromosome
Genomic location 3595942 - 3596826 (- strand)

Cross-References

RefSeq YP_007230087.1
GI 431803184
Entrez 14289635
INSDC AGA74144.1
NCBI Locus Tag B479_16260
UniParc UPI0002A173E0
UniProtKB Acc L0FJL7
UniProtKB ID L0FJL7_PSEPU
UniRef100 UniRef100_L0FJL7
UniRef50 UniRef50_B1J793
UniRef90 UniRef90_B1J793

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.59
Kyte-Doolittle Hydrophobicity Value -0.124
Molecular Weight (kDa) 32569.0
Isoelectric Point (pI) 8.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000055 (3840 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_16260

Human Homologs

References

No references are associated with this feature.