Pseudomonas putida HB3267, B479_16295

Gene Feature Overview

Strain	Pseudomonas putida HB3267 GCF_000325725.1|latest
Locus Tag	B479_16295
Name
Replicon	chromosome
Genomic location	3602689 - 3603498 (+ strand)

Cross-References

RefSeq	YP_007230094.1
GI	431803191
Entrez	14289642
INSDC	AGA74151.1
NCBI Locus Tag	B479_16295
UniParc	UPI0002A17C46
UniProtKB Acc	L0FN39
UniProtKB ID	L0FN39_PSEPU
UniRef100	UniRef100_A0A099N368
UniRef50	UniRef50_G8PXJ8
UniRef90	UniRef90_I7BZE6

Product

Feature Type	CDS
Coding Frame	1
Product Name	binding-protein-dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	6.19
Kyte-Doolittle Hydrophobicity Value	1.021
Molecular Weight (kDa)	29.2
Isoelectric Point (pI)	10.20

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 541 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG016521 (124 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: B479_16295 Search term: binding-protein-dependent transport system inner membrane protein

Human Homologs

References