Pseudomonas putida HB3267, B479_17340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_17340
Name
Replicon chromosome
Genomic location 3807350 - 3809464 (+ strand)

Cross-References

RefSeq YP_007230303.1
GI 431803400
Entrez 14289851
INSDC AGA74360.1
NCBI Locus Tag B479_17340
UniParc UPI0002A16D4C
UniProtKB Acc L0FNX8
UniProtKB ID L0FNX8_PSEPU
UniRef100 UniRef100_A0A059V0S8
UniRef50 UniRef50_A4Y0T1
UniRef90 UniRef90_V9X046

Product

Feature Type CDS
Coding Frame 1
Product Name
GAF and PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -20.38
Kyte-Doolittle Hydrophobicity Value -0.332
Molecular Weight (kDa) 79536.8
Isoelectric Point (pI) 5.62

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 516 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025328 (43 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_17340

Human Homologs

References

No references are associated with this feature.