Pseudomonas putida HB3267, B479_17490

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_17490
Name
Replicon chromosome
Genomic location 3843100 - 3844425 (+ strand)

Cross-References

RefSeq YP_007230333.1
GI 431803430
Entrez 14289881
INSDC AGA74390.1
NCBI Locus Tag B479_17490
UniParc UPI00021731E5
UniProtKB Acc L0FP03
UniProtKB ID L0FP03_PSEPU
UniRef100 UniRef100_A0A099N1D1
UniRef50 UniRef50_P42449
UniRef90 UniRef90_Q3KA64

Product

Feature Type CDS
Coding Frame 1
Product Name
isocitrate lyase
Synonyms
Evidence for Translation
Charge (pH 7) -9.74
Kyte-Doolittle Hydrophobicity Value -0.336
Molecular Weight (kDa) 48.7
Isoelectric Point (pI) 5.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016689 (181 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_17490
Search term: isocitrate lyase

Human Homologs

References

No references are associated with this feature.