Pseudomonas putida HB3267, B479_17530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_17530
Name
Replicon chromosome
Genomic location 3850345 - 3851724 (+ strand)

Cross-References

RefSeq YP_007230341.1
GI 431803438
EC Number 1.6.99.5
Entrez 14289889
INSDC AGA74398.1
NCBI Locus Tag B479_17530
UniParc UPI0001717244
UniProtKB Acc L0FMZ0
UniProtKB ID L0FMZ0_PSEPU
UniRef100 UniRef100_L0FMZ0
UniRef50 UniRef50_P31979
UniRef90 UniRef90_Q4K9T2

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH dehydrogenase I subunit F
Synonyms
Evidence for Translation
Charge (pH 7) 1.19
Kyte-Doolittle Hydrophobicity Value -0.203
Molecular Weight (kDa) 49640.5
Isoelectric Point (pI) 7.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 458 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002153 (868 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_17530

Human Homologs

Ensembl 110, assembly GRCh38.p14
NADH:ubiquinone oxidoreductase core subunit V1 [Source:HGNC Symbol;Acc:HGNC:7716]
E-value: 1.5e-87
Percent Identity: 41.5

References

No references are associated with this feature.